The Wild Card round featured the second-place finishers from each group taking on the third-place sides in a two-leg playoff.
- Apa Nou vs FC Vanyan
After a disappointing group stage, FC Vanyan rediscovered their form in the knockout stage. They controlled both legs against Apa Nou, winning 2–0 on aggregate to book a semifinal clash with Group A rivals Tiki Taka. - Lakayanm vs Viv Ansam
Viv Ansam, fresh off their upset win in the group stage, continued to surprise with a 2–2 draw in the first leg against Lakayanm. However, their Cinderella run came to an end in the second leg as Lakayanm roared back with a dominant 5–1 victory, advancing with a 7–3 aggregate score.
Semifinals
- Capital United vs Lakayanm
The first semifinal delivered high drama. The opening leg ended 1–1, leaving everything to play for. In the return leg, Capital United rose to the occasion, edging Lakayanm 3–2 in a thriller to secure a 4–3 aggregate win and their place in the final. - Tiki Taka vs FC Vanyan
The second semifinal was a clash of rivals, and it lived up to the hype. Tiki Taka captain Molino scored the decisive goal in the first leg to give his side a 1–0 advantage. The return leg ended 1–1, allowing Tiki Taka to progress 2–1 on aggregate.
The Final Awaits
For the second consecutive season, the grand finale will feature Tiki Taka vs Capital United. The two giants faced off just two weeks ago in Copa Elite Season 2, and now they meet again on the biggest stage of Season 3.